dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03064
Location and strand information: 296717 - 299242 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7653
Protein molecular weight: 95236.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03065
Location and strand information: 299328 - 302129 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5098
Protein molecular weight: 104139.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03066
Location and strand information: 302135 - 304024 (+)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 6.2573
Protein molecular weight: 69714.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03067
Location and strand information: 304285 - 305805 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3912
Protein molecular weight: 56169.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03068
Location and strand information: 305862 - 309017 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8458
Protein molecular weight: 118364.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03069
Location and strand information: 309134 - 310603 (+)
Family: null
Protein type: null
Protein description: L-Rhamnulokinase

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03070
Location and strand information: 310630 - 311883 (+)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03071
Location and strand information: 311952 - 312983 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03072
Location and strand information: 313047 - 313856 (+)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03073
Location and strand information: 313889 - 315214 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.334
Protein molecular weight: 50384.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03074
Location and strand information: 315376 - 316299 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03075
Location and strand information: 316341 - 316538 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03076
Location and strand information: 316785 - 320024 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03077
Location and strand information: 320038 - 322182 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03078
Location and strand information: 322355 - 325657 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3255
Protein molecular weight: 123210.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03079
Location and strand information: 325681 - 326913 (+)
Family: GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1704
Protein molecular weight: 46326.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03080
Location and strand information: 327164 - 330406 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03081
Location and strand information: 330419 - 332416 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03082
Location and strand information: 332572 - 335433 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.0128
Protein molecular weight: 107585.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03083
Location and strand information: 335463 - 336839 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0473
Protein molecular weight: 49627.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03084
Location and strand information: 336952 - 339099 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03085
Location and strand information: 339323 - 342535 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03086
Location and strand information: 342596 - 344659 (+)
Family: PL8|PL8_3
Protein type: CAZyme
Protein description: Chondroitinase-AC
Protein isoelectric point: 6.5039
Protein molecular weight: 77359.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03087
Location and strand information: 344667 - 345680 (+)
Family: 8.A.5.1.3
Protein type: TC
Protein description: L-glyceraldehyde 3-phosphate reductase

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03088
Location and strand information: 345784 - 346422 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03089
Location and strand information: 346539 - 347168 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03090
Location and strand information: 347259 - 350306 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 9.664
Protein molecular weight: 113033.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_88|CGC7
Gene ID: MGYG000001370_03091
Location and strand information: 350375 - 353182 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 8.0891
Protein molecular weight: 103092.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001370_03064	GH105_e12
MGYG000001370_03065	GH106_e0\|3.2.1.174	pectin
MGYG000001370_03066	PL11_e1
MGYG000001370_03067	GH28_e61
MGYG000001370_03068	GH106_e21
MGYG000001370_03073	GH105_e39
MGYG000001370_03078	GH106_e9
MGYG000001370_03079
MGYG000001370_03082	GH2_e89\|3.2.1.23	beta-galactan
MGYG000001370_03083	PL1_e64\|4.2.2.2	pectin
MGYG000001370_03086	PL8_e6
MGYG000001370_03090	GH3_e113\|3.2.1.-	beta-glucan
MGYG000001370_03091

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001370_03064	hypothetical protein	CAZyme	296717	299242	+	GH105
MGYG000001370_03065	hypothetical protein	CAZyme	299328	302129	+	GH106
MGYG000001370_03066	Rhamnogalacturonan endolyase YesW	CAZyme	302135	304024	+	PL11
MGYG000001370_03067	hypothetical protein	CAZyme	304285	305805	+	GH28
MGYG000001370_03068	hypothetical protein	CAZyme	305862	309017	+	GH106
MGYG000001370_03069	L-Rhamnulokinase	null	309134	310603	+	FGGY_N\| FGGY_C
MGYG000001370_03070	L-rhamnose isomerase	null	310630	311883	+	RhaA
MGYG000001370_03071	L-rhamnose-proton symporter	TC	311952	312983	+	2.A.7.6.1
MGYG000001370_03072	Rhamnulose-1-phosphate aldolase	null	313047	313856	+	Aldolase_II
MGYG000001370_03073	hypothetical protein	CAZyme	313889	315214	+	GH105
MGYG000001370_03074	HTH-type transcriptional activator RhaS	TF	315376	316299	+	HTH_AraC+HTH_AraC
MGYG000001370_03075	hypothetical protein	null	316341	316538	+	No domain
MGYG000001370_03076	TonB-dependent receptor SusC	TC	316785	320024	+	1.B.14.6.1
MGYG000001370_03077	hypothetical protein	TC	320038	322182	+	8.A.46.1.3
MGYG000001370_03078	hypothetical protein	CAZyme	322355	325657	+	GH106
MGYG000001370_03079	hypothetical protein	CAZyme	325681	326913	+	GH43
MGYG000001370_03080	TonB-dependent receptor SusC	TC	327164	330406	+	1.B.14.6.1
MGYG000001370_03081	hypothetical protein	null	330419	332416	+	SusD-like_3\| SusD_RagB
MGYG000001370_03082	Beta-galactosidase	CAZyme	332572	335433	+	GH2
MGYG000001370_03083	hypothetical protein	CAZyme	335463	336839	+	PL1_2\| PL1
MGYG000001370_03084	hypothetical protein	null	336952	339099	+	No domain
MGYG000001370_03085	hypothetical protein	null	339323	342535	+	DUF4450
MGYG000001370_03086	Chondroitinase-AC	CAZyme	342596	344659	+	PL8\| PL8_3
MGYG000001370_03087	L-glyceraldehyde 3-phosphate reductase	TC	344667	345680	+	8.A.5.1.3
MGYG000001370_03088	hypothetical protein	null	345784	346422	+	DUF4136
MGYG000001370_03089	hypothetical protein	null	346539	347168	+	OMP_b-brl
MGYG000001370_03090	Beta-hexosaminidase	CAZyme	347259	350306	-	GH3
MGYG000001370_03091	Beta-hexosaminidase	CAZyme	350375	353182	-	GH3
Protein ID	Protein Name	Type	Start	End	Strand	Signature